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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107260575_107260672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107260575 - 107260672

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TCCTGCTAAAGA

Flanking Amino Acid:

GTMVPRSNIAVYRRIRKALN

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

77.9

38.6

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

88.1

0.86

0.6

24.1

Minor 5ss

39.7

-1.2

3.2

56.4

Minor BPS

45.8

-0.3

2.3

58.03

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026809

107247258 - 107263627

16370

ENSAPLT00000008052

107247258 - 107261448

14191