Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_107289481_107296499_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107289481 - 107296499

Intron Length:

7019

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

AATTTCACAACC

Flanking Amino Acid:

TPLDPKYIDIGPLFVTMTKT

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.7

35.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

70.8

0.47

1.1

65.6

44.4

Minor 5ss

41.2

-1

2.9

54.5

43.9

Minor BPS

53.3

0.08

1.8

67.4

37.4

Associated Gene:

Gene:

WDR35

Ensembl Gene ID:

ENSAPLG00000007231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007545

107276435 - 107310094

33660