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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107304460_107305846_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
107304460 - 107305846

Intron Length:
1387

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTAAGTTTA

5'SS Class:
major

3'SS Sequence:
CATTCTTGCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTAAAT

U12 Branch Point Sequence:
ATGACTTTAAAT

Flanking Amino Acid:
HIYDSQGNFIVKMKLSCLAN

Intron Amino Acid Position:
191

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.4
0.67
1
78.8
30.7

Major BPS
82.3
0.8
0.9
87.6
25.7

Major PPT
68.2
0.41
0.9
61.6
39.6

Minor 5ss
46.3
-0.4
2.8
64.1
41.5

Minor BPS
65.3
0.56
1.4
76.48
39.9

Associated Gene:

Gene:
WDR35

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

107276435 - 107310094
33660