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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107334501_107335835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107334501 - 107335835

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

AAGTTTTTAAGA

Flanking Amino Acid:

VFFALFIILKAYLINCVWNC

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

56.7

0.21

1.6

61.9

38.7

Associated Gene:

Gene:

LAPTM4A

Ensembl Gene ID:

ENSAPLG00000006688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006949

107333831 - 107345878

12048