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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107335932_107337054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107335932 - 107337054

Intron Length:

1123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCAACTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TTTGTTTCAACT

Flanking Amino Acid:

PRIKDYLDQLPDFPYKDDLL

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

86.2

29.2

Major BPS

0.57

1.2

77.7

37.1

Major PPT

0.43

64.4

41.7

Minor 5ss

38.5

-1.3

2.8

49.8

40.3

Minor BPS

64.9

0.55

1.6

83.3

38.2

Associated Gene:

Gene:

LAPTM4A

Ensembl Gene ID:

ENSAPLG00000006688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006949

107333831 - 107345878

12048