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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107337178_107337270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107337178 - 107337270

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

CTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TACTTCATAAGC

Flanking Amino Acid:

SAMMVYGAIAHRVGWLIPFF

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

78.6

0.71

79.6

32.9

Major PPT

92.1

0.95

0.5

92.3

18.1

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

0.01

1.9

63.81

41.7

Associated Gene:

Gene:

LAPTM4A

Ensembl Gene ID:

ENSAPLG00000006688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006949

107333831 - 107345878

12048