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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107496677_107497233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107496677 - 107497233

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCTGAT

5'SS Class:

major

3'SS Sequence:

CTCCCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

CTGAGAGTAATT

Flanking Amino Acid:

GIMDRKEVLGGVIAGGLVGL

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

72.5

39.1

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

78.2

0.63

0.8

68.8

31.6

Minor 5ss

38.8

-1.3

3.5

57.9

46.7

Minor BPS

39.5

-0.7

2.4

57.08

45.9

Associated Gene:

Gene:

SDC1

Ensembl Gene ID:

ENSAPLG00000010484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010914

107496136 - 107522781

26646