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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107497364_107497590_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107497364 - 107497590

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGACT

5'SS Class:

major

3'SS Sequence:

TGTGTCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATGAA

U12 Branch Point Sequence:

TGTGTCCCAACA

Flanking Amino Acid:

EVSEDGSGDPGDFILIKDED

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

72.5

38.4

Major BPS

54.1

0.1

1.1

45.7

37.1

Major PPT

69.2

0.43

63.2

38.4

Minor 5ss

29.9

-2.3

3.2

41.9

44.5

Minor BPS

48.3

-0.1

64.86

41.3

Associated Gene:

Gene:

SDC1

Ensembl Gene ID:

ENSAPLG00000010484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010914

107496136 - 107522781

26646