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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10752432_10755061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10752432 - 10755061

Intron Length:

2630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

ATGCTGTTCACT

Flanking Amino Acid:

AASSKLLQEKLSHYLDIVEV

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

79.5

0.66

0.7

71.9

32.6

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

45.6

-0.2

2.4

66.94

Associated Gene:

Gene:

VPS54

Ensembl Gene ID:

ENSAPLG00000009734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010183

10745989 - 10784089

38101