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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107541089_107541357_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107541089 - 107541357

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

AATCACTGAAAA

Flanking Amino Acid:

ALESISPDQQNEMVKELDGH

Intron Amino Acid Position:

827

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

83.4

28.2

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

36.3

-1.5

3.3

49.5

46.6

Minor BPS

48.8

-0

1.7

60.8

37.6

Associated Gene:

Gene:

PUM2

Ensembl Gene ID:

ENSAPLG00000010496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048191

107535541 - 107579958

44418

ENSAPLT00000047799

107535541 - 107579958

44418

ENSAPLT00000024396

107535541 - 107579958

44418

ENSAPLT00000011050

107535541 - 107579958

44418