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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107566516_107567685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107566516 - 107567685

Intron Length:

1170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

GATAGAATAATC

Flanking Amino Acid:

AGLAAAATLAGPAVVPPQYY

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.6

32.8

Major BPS

71.2

0.53

72.3

32.8

Major PPT

82.1

0.72

0.8

80.5

31.5

Minor 5ss

37.5

-1.4

3.2

47.2

Minor BPS

41.4

-0.6

2.1

51.69

38.7

Associated Gene:

Gene:

PUM2

Ensembl Gene ID:

ENSAPLG00000010496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048191

107535541 - 107579958

44418

ENSAPLT00000024396

107535541 - 107579958

44418

ENSAPLT00000011050

107535541 - 107579958

44418