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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107573498_107574138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107573498 - 107574138

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TCTTTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

ATACTCAGAATC

Flanking Amino Acid:

LDSRFRKGAFGTRDAETDGP

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

76.1

32.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

88.7

0.87

0.6

88.3

21.5

Minor 5ss

38.6

-1.3

2.8

51.7

39.2

Minor BPS

46.9

-0.2

1.6

57.12

34.5

Associated Gene:

Gene:

PUM2

Ensembl Gene ID:

ENSAPLG00000010496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047799

107535541 - 107579958

44418

ENSAPLT00000024396

107535541 - 107579958

44418

ENSAPLT00000011050

107535541 - 107579958

44418

ENSAPLT00000048191

107535541 - 107579958

44418