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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10758959_10760011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10758959 - 10760011

Intron Length:

1053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTGATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTTGATA

Flanking Amino Acid:

LEDDCQILEEERLVSLVFGL

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.9

44.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.1

0.72

0.9

80.6

31.5

Minor 5ss

36.8

-1.5

3.2

49.6

46.6

Minor BPS

80.4

0.95

0.9

85.58

26.2

Associated Gene:

Gene:

VPS54

Ensembl Gene ID:

ENSAPLG00000009734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010183

10745989 - 10784089

38101