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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107623675_107624088_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107623675 - 107624088

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CAATTTTTATTT

Flanking Amino Acid:

GNFTSIVNFFSFIAWFFYGM

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

52.6

0.16

1.5

64.83

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011730

107616705 - 107625526

8822