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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10768985_10770307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10768985 - 10770307

Intron Length:

1323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTAAATGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

TTTCTGCTAAAT

Flanking Amino Acid:

RISLPEKKTTATEERKPTEF

Intron Amino Acid Position:

721

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

27.8

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

65.8

0.36

62.1

43.8

Minor 5ss

46.4

-0.4

2.5

62.6

42.2

Minor BPS

46.8

-0.1

2.4

75.24

Associated Gene:

Gene:

VPS54

Ensembl Gene ID:

ENSAPLG00000009734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010183

10745989 - 10784089

38101