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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10775445_10777036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10775445 - 10777036

Intron Length:

1592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TCTGGATTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCCTCTCTCACT

Flanking Amino Acid:

GLKTITTKNLALSSRCLQLI

Intron Amino Acid Position:

807

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

72.7

0.56

30.1

Major PPT

76.5

0.6

68.7

41.2

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

49.9

0.08

2.1

71.75

45.6

Associated Gene:

Gene:

VPS54

Ensembl Gene ID:

ENSAPLG00000009734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010183

10745989 - 10784089

38101