Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_107762111_107765590_F

Intron Information:

Intron Rank:

147984

Intron Class:

major

Intron Phase:

Intron Coordinates:

107762111 - 107765590

Intron Length:

3480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGACA

5'SS Class:

major

3'SS Sequence:

TATCCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

CCTCCTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

68.4

38.2

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

73.3

0.52

0.9

66.9

Minor 5ss

25.7

-2.8

3.1

31.1

42.7

Minor BPS

56.4

0.18

1.7

63.08

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031558

107761986 - 107798743

36758