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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107843344_107843816_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107843344 - 107843816

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAATTATC

5'SS Class:

major

3'SS Sequence:

TTTCCCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TACGATTTAACT

Flanking Amino Acid:

SIGPRKNMKENLKLFEDPDL

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

71.8

38.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

84.5

0.78

0.7

77.5

31.2

Minor 5ss

41.6

-0.9

2.8

51.5

39.1

Minor BPS

60.3

0.4

1.6

73.69

43.2

Associated Gene:

Gene:

HS1BP3

Ensembl Gene ID:

ENSAPLG00000011418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011893

107830390 - 107881271

50882