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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107843969_107865183_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107843969 - 107865183

Intron Length:

21215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGACT

5'SS Class:

strong_major

3'SS Sequence:

CTTATGTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TGTCTCTTATGT

Flanking Amino Acid:

EEDLDPLGIIRTKKTKKASA

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.8

36.4

Major BPS

79.1

0.72

69.3

38.4

Major PPT

79.3

0.66

0.9

37.1

Minor 5ss

-1

3.1

58.1

46.3

Minor BPS

53.1

0.17

1.9

73.71

Associated Gene:

Gene:

HS1BP3

Ensembl Gene ID:

ENSAPLG00000011418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011893

107830390 - 107881271

50882