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Intron Name: Anas_platyrhynchos_platyrhynchos_3_107867855_107876424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107867855 - 107876424

Intron Length:

8570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAC

U12 Branch Point Sequence:

AGAAACTTACCC

Flanking Amino Acid:

HKPEDVVQFMVSKKYSEIEE

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

80.3

32.2

Major BPS

64.9

0.37

0.9

55.4

32.3

Major PPT

85.6

0.8

0.9

80.6

Minor 5ss

38.1

-1.3

3.5

54.6

Minor BPS

-0.1

1.8

56.76

40.8

Associated Gene:

Gene:

HS1BP3

Ensembl Gene ID:

ENSAPLG00000011418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011893

107830390 - 107881271

50882