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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10788012_10788199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10788012 - 10788199

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCAGA

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

TCATGCTTACGT

Flanking Amino Acid:

IDMEIIVNPKTLDGGLNVIQ

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.8

41.1

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

92.3

0.95

0.6

85.1

29.7

Minor 5ss

38.8

-1.3

2.8

49.6

46.2

Minor BPS

47.5

-0.1

2.3

68.01

48.6

Associated Gene:

Gene:

UGP2

Ensembl Gene ID:

ENSAPLG00000009870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044737

10786272 - 10810890

24619

ENSAPLT00000010306

10786272 - 10810890

24619