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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10788398_10789463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10788398 - 10789463

Intron Length:

1066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTACCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TCTTCTTTTACC

Flanking Amino Acid:

VTNKTRADVKGGTLTQYENK

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

74.2

0.6

39.4

Major PPT

80.9

0.7

0.8

74.4

30.6

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

71.1

0.65

1.6

78.32

37.8

Associated Gene:

Gene:

UGP2

Ensembl Gene ID:

ENSAPLG00000009870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044737

10786272 - 10810890

24619

ENSAPLT00000010306

10786272 - 10810890

24619