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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10790491_10792214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10790491 - 10792214

Intron Length:

1724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCATCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

ACATGCTGAATT

Flanking Amino Acid:

FLDLTVQQIEHLNKTYNTDV

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.1

75.8

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

80.3

0.68

0.8

77.9

29.1

Minor 5ss

-0.3

2.5

62.8

41.8

Minor BPS

51.8

0.13

1.9

68.01

Associated Gene:

Gene:

UGP2

Ensembl Gene ID:

ENSAPLG00000009870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044737

10786272 - 10810890

24619

ENSAPLT00000010306

10786272 - 10810890

24619