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Intron Name: Anas_platyrhynchos_platyrhynchos_3_108017555_108030108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

108017555 - 108030108

Intron Length:

12554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CTCTTCCTAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

89.8

0.9

0.7

84.2

30.9

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

57.8

0.11

1.8

63.18

44.9

Associated Gene:

Gene:

LDAH

Ensembl Gene ID:

ENSAPLG00000011591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041458

107912429 - 108030215

117787