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Intron Name: Anas_platyrhynchos_platyrhynchos_3_108052451_108054660_F

Intron Information:

Intron Rank:

141631

Intron Class:

major

Intron Phase:

Intron Coordinates:

108052451 - 108054660

Intron Length:

2210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTGCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATTAT

U12 Branch Point Sequence:

AGTACCTTAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

63.3

0.33

1.1

41.2

Major PPT

82.2

0.72

0.8

79.1

32.9

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

64.9

0.47

1.7

71.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040953

108051907 - 108055284

3378