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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10805504_10810526_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10805504 - 10810526

Intron Length:

5023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTGG

5'SS Class:

major

3'SS Sequence:

CTTTTAATTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCCTTTTAATT

Flanking Amino Acid:

MSFAKDFSKAMSQAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.6

46.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.4

0.53

1.1

35.2

Minor 5ss

41.9

-0.9

3.2

55.4

48.8

Minor BPS

70.4

0.72

1.2

80.3

36.2

Associated Gene:

Gene:

UGP2

Ensembl Gene ID:

ENSAPLG00000009870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044737

10786272 - 10810890

24619

ENSAPLT00000010306

10786272 - 10810890

24619