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Intron Name: Anas_platyrhynchos_platyrhynchos_3_108229288_108229416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108229288 - 108229416

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGAGCA

5'SS Class:

major

3'SS Sequence:

TCATCATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTGTTTTAAAA

Flanking Amino Acid:

TISERVLFSYDSEKVELEWN

Intron Amino Acid Position:

1095

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

61.4

37.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.5

0.69

0.9

77.5

35.5

Minor 5ss

29.5

-2.4

3.5

35.7

43.1

Minor BPS

66.3

0.51

1.5

75.65

35.9

Associated Gene:

Gene:

APOB

Ensembl Gene ID:

ENSAPLG00000011670

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012258

108212231 - 108249054

36824