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Intron Name: Anas_platyrhynchos_platyrhynchos_3_108234970_108235271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108234970 - 108235271

Intron Length:

302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCTT

5'SS Class:

major

3'SS Sequence:

ACTGAATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCTGACTGAATT

Flanking Amino Acid:

GYSQDGKQDQEVMKGIMLNL

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

66.9

44.1

Major BPS

0.87

0.8

85.6

Major PPT

71.8

0.49

66.5

43.4

Minor 5ss

-1.7

3.8

55.9

48.3

Minor BPS

55.4

0.25

1.8

73.59

43.5

Associated Gene:

Gene:

APOB

Ensembl Gene ID:

ENSAPLG00000011670

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012258

108212231 - 108249054

36824