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Intron Name: Anas_platyrhynchos_platyrhynchos_3_108235449_108236004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108235449 - 108236004

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAACAA

5'SS Class:

major

3'SS Sequence:

CTGTTCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTCTGTTCATTT

Flanking Amino Acid:

YGFGPRDIFELGLDGKGFEP

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

61.3

39.2

Major BPS

84.8

0.86

85.7

34.9

Major PPT

80.8

0.69

0.9

77.9

35.1

Minor 5ss

29.6

-2.3

3.3

38.7

46.3

Minor BPS

45.9

-0.2

2.1

67.22

44.6

Associated Gene:

Gene:

APOB

Ensembl Gene ID:

ENSAPLG00000011670

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012258

108212231 - 108249054

36824