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Intron Name: Anas_platyrhynchos_platyrhynchos_3_108334803_108335134_F

Intron Information:

Intron Rank:

137781

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

108334803 - 108335134

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCTGTATA

5'SS Class:

major

3'SS Sequence:

CTATCTGAAAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTAAATTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.3

72.4

38.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

51.4

0.03

1.2

53.1

39.7

Minor 5ss

-1

2.6

48.2

41.9

Minor BPS

0.46

1.8

83.39

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039001

108325604 - 108335336

9733