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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10839884_10840083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10839884 - 10840083

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TAGCAATGAAAA

Flanking Amino Acid:

VRDIWFGTPAGEFVSMGVIS

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.8

39.3

Major BPS

68.1

0.45

58.1

38.5

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

40.1

-1.1

3.2

57.3

46.8

Minor BPS

42.4

-0.5

1.8

51.41

38.6

Associated Gene:

Gene:

MDH1

Ensembl Gene ID:

ENSAPLG00000009983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010427

10839080 - 10850036

10957