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Intron Name: Anas_platyrhynchos_platyrhynchos_3_10842080_10843450_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10842080 - 10843450

Intron Length:

1371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

CATTCTACAATT

Flanking Amino Acid:

LDKYAKKTVKVVVVGNPANT

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

83.1

28.6

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

81.8

0.72

86.9

31.1

Minor 5ss

35.4

-1.7

2.7

43.5

43.6

Minor BPS

50.4

0.09

1.8

70.19

41.1

Associated Gene:

Gene:

MDH1

Ensembl Gene ID:

ENSAPLG00000009983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010427

10839080 - 10850036

10957