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Intron Name: Anas_platyrhynchos_platyrhynchos_3_108627723_108633658_R

Intron Information:

Intron Rank:

138201

Intron Class:

major

Intron Phase:

Intron Coordinates:

108627723 - 108633658

Intron Length:

5936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTCTC

5'SS Class:

major

3'SS Sequence:

CTCTGTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTCATTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

67.1

44.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.72

0.8

75.5

33.1

Minor 5ss

36.9

-1.5

3.3

44.4

43.5

Minor BPS

65.5

0.57

1.9

85.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043805

108627225 - 108702893

75669