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Intron Name: Anas_platyrhynchos_platyrhynchos_3_108658020_108659313_F

Intron Information:

Intron Rank:

123387

Intron Class:

major

Intron Phase:

Intron Coordinates:

108658020 - 108659313

Intron Length:

1294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TGTAACAAACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

78.6

37.2

Major BPS

77.3

0.68

79.3

29.4

Major PPT

79.8

0.67

77.1

37.1

Minor 5ss

33.5

-1.9

3.2

40.3

45.6

Minor BPS

41.2

-0.5

2.2

63.66

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039129

108657863 - 108659758

1896