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Intron Name: Anas_platyrhynchos_platyrhynchos_3_108985569_109023674_F

Intron Information:

Intron Rank:

126292

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

108985569 - 109023674

Intron Length:

38106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAATC

5'SS Class:

strong_major

3'SS Sequence:

CTTCAAAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TTCTCTTCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

84.1

26.4

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

58.8

0.2

1.1

52.6

39.4

Minor 5ss

32.6

-2

42.8

44.4

Minor BPS

62.4

0.38

1.6

72.74

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043042

108985433 - 109057218

71786