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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109478863_109480454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109478863 - 109480454

Intron Length:

1592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGCTT

5'SS Class:

major

3'SS Sequence:

TTTTAAATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTTTTTAAAT

Flanking Amino Acid:

ETKDAEADKEGMLKSKKTRK

Intron Amino Acid Position:

1292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

68.5

42.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.4

0.71

0.9

74.5

38.9

Minor 5ss

42.1

-0.9

3.5

64.4

Minor BPS

75.1

0.86

1.2

87.12

31.6

Associated Gene:

Gene:

ATAD2B

Ensembl Gene ID:

ENSAPLG00000012458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045611

109475889 - 109553259

77371

ENSAPLT00000035159

109475889 - 109553259

77371

ENSAPLT00000013007

109475903 - 109546338

70436