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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109516318_109521783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109516318 - 109521783

Intron Length:

5466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATATATTATTT

Flanking Amino Acid:

FLGELAEKCVGYCGADIKAL

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

75.9

0.64

66.1

40.5

Major PPT

69.7

0.44

63.7

42.8

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

49.4

0.04

1.8

70.81

40.1

Associated Gene:

Gene:

ATAD2B

Ensembl Gene ID:

ENSAPLG00000012458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045611

109475889 - 109553259

77371

ENSAPLT00000035159

109475889 - 109553259

77371

ENSAPLT00000013007

109475903 - 109546338

70436