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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109575035_109577320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109575035 - 109577320

Intron Length:

2286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTT

Flanking Amino Acid:

RVIQKFNVSHRISHVRDFIT

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.8

0.76

0.8

81.9

34.1

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

0.58

1.5

81.3

34.9

Associated Gene:

Gene:

UBXN2A

Ensembl Gene ID:

ENSAPLG00000012737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013257

109564602 - 109577603

13002