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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109650247_109654046_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109650247 - 109654046

Intron Length:

3800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TTTTGTCTGAAG

Flanking Amino Acid:

FDLPIIEMKHAIQKCSAVSE

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.9

Major BPS

64.5

0.36

65.2

28.2

Major PPT

78.1

0.63

79.6

32.8

Minor 5ss

49.1

-0.1

2.4

64.8

41.7

Minor BPS

45.4

-0.5

2.2

60.15

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013617

109650137 - 109664613

14477