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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109677451_109679816_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
109677451 - 109679816

Intron Length:
2366

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTACGGGAC

5'SS Class:
major

3'SS Sequence:
ATGATTTTAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATGAT

U12 Branch Point Sequence:
ATGATTTTAACA

Flanking Amino Acid:
VEIETISPGDGRTFPKKGQT

Intron Amino Acid Position:
129

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.6
0.49
1.1
58.9
40.5

Major BPS
84.6
0.86
1
74
41.2

Major PPT
71.2
0.48
1
66.2
43.5

Minor 5ss
28.9
-2.4
3.7
40.7
46

Minor BPS
66.3
0.51
1.3
69.76
36.6

Associated Gene:

Gene:
FKBP1B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

109677066 - 109720557
43492