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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109724973_109725023_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

109724973 - 109725023

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTACTACAA

5'SS Class:

weak_major

3'SS Sequence:

TAAGCTTCCTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

GTTTTCTAAGCT

Flanking Amino Acid:

FNVCNRYLVVLPVSPVAFQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.4

0.01

1.1

46.5

37.1

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

-0

1.7

58.5

42.5

Minor 5ss

32.8

-2

3.4

44.5

44.3

Minor BPS

59.1

0.36

1.9

80.23

41.8

Associated Gene:

Gene:

SF3B6

Ensembl Gene ID:

ENSAPLG00000025645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018406

109724777 - 109728908

4132