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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109728645_109728878_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109728645 - 109728878

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

GTTTCCCCAACA

Flanking Amino Acid:

MAMQAAKRANIRLPPEVNRI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

31.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

72.7

0.51

0.9

34.1

Minor 5ss

32.3

-2

3.3

46.1

42.2

Minor BPS

62.4

0.39

1.9

77.87

38.2

Associated Gene:

Gene:

SF3B6

Ensembl Gene ID:

ENSAPLG00000025645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035999

109724777 - 109728908

4132

ENSAPLT00000018406

109724777 - 109728908

4132