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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109732007_109733204_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
109732007 - 109733204

Intron Length:
1198

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTGAGAGGT

5'SS Class:
strong_major

3'SS Sequence:
TGTCCTCGTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GAATCAT

U12 Branch Point Sequence:
TTTCCCTTATGT

Flanking Amino Acid:
LTAFQLLHFVGKIQKGERVL

Intron Amino Acid Position:
136

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.5
0.86
0.8
75
35.2

Major BPS
62.7
0.32
1.3
66
40.9

Major PPT
75.8
0.58
0.9
73.3
37.1

Minor 5ss
26.7
-2.7
3.3
38.5
46.6

Minor BPS
64.7
0.54
1.9
85.49
40.8

Associated Gene:

Gene:
TP53I3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

109729677 - 109734090
4414