Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_109738170_109739339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109738170 - 109739339

Intron Length:

1170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTACGTTGA

5'SS Class:

major

3'SS Sequence:

CTGTATTATCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTTTCTGTATT

Flanking Amino Acid:

ADEDSIYLKNPDGGLIAVKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.3

66.1

42.4

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

74.1

0.54

65.9

44.2

Minor 5ss

39.9

-1.1

47.6

Minor BPS

62.2

0.46

1.8

84.17

36.4

Associated Gene:

Gene:

PFN4

Ensembl Gene ID:

ENSAPLG00000013316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013858

109736468 - 109740524

4057