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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109739478_109740407_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109739478 - 109740407

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGAACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAA

U12 Branch Point Sequence:

CGGTCCATAACA

Flanking Amino Acid:

KVCASTSGFYVPPENAINLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

27.9

Major BPS

69.4

0.48

1.2

63.4

44.3

Major PPT

64.4

0.32

Minor 5ss

36.8

-1.5

3.4

53.7

43.8

Minor BPS

0.4

1.7

69.15

42.9

Associated Gene:

Gene:

PFN4

Ensembl Gene ID:

ENSAPLG00000013316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013858

109736468 - 109740524

4057