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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109750099_109751183_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109750099 - 109751183

Intron Length:

1085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

TTTGTGTTCACA

Flanking Amino Acid:

YIASEAHRTRRLRVVEHHTD

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

81.5

0.71

0.9

75.8

38.1

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

47.8

-0.1

2.5

70.02

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013866

109741668 - 109751378

9711

ENSAPLT00000028298

109741668 - 109751378

9711

ENSAPLT00000026757

109741668 - 109751378

9711