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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109753301_109754603_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109753301 - 109754603

Intron Length:

1303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

CTTTGCTTAATG

Flanking Amino Acid:

MFDRDQFSPDDFLGRTEVPV

Intron Amino Acid Position:

1077

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

74.2

0.6

39.4

Major PPT

69.5

0.44

63.2

38.4

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

66.2

0.37

1.9

70.75

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036827

109753143 - 109784970

31828

ENSAPLT00000034290

109753143 - 109784970

31828

ENSAPLT00000029966

109753143 - 109757202

4060

ENSAPLT00000013987

109753143 - 109785296

32154

ENSAPLT00000047373

109753143 - 109785437

32295