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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109772263_109773381_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109772263 - 109773381

Intron Length:

1119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACCAAC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTAGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TTTTTCTTAGTA

Flanking Amino Acid:

SERTTSAAPSVCQVIAMYDY

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.2

68.4

38.7

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

0.76

0.8

82.5

27.7

Minor 5ss

39.8

-1.1

2.9

51.2

45.7

Minor BPS

73.6

0.74

1.4

82.77

32.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036827

109753143 - 109784970

31828

ENSAPLT00000034290

109753143 - 109784970

31828

ENSAPLT00000013987

109753143 - 109785296

32154