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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109776426_109776644_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

109776426 - 109776644

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCGAAATCA

5'SS Class:

weak_major

3'SS Sequence:

ACAGTCTTCCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTAAAT

U12 Branch Point Sequence:

TACTGAGTAAAT

Flanking Amino Acid:

PKSYVKLLPGTECCEKSMEF

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

54.5

32.8

Major BPS

58.4

0.21

1.2

38.7

Major PPT

56.1

0.14

1.1

52.6

41.1

Minor 5ss

23.5

-3

3.8

30.3

36.8

Minor BPS

41.6

-0.5

2.5

63.42

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047373

109753143 - 109785437

32295