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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109781246_109784830_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

109781246 - 109784830

Intron Length:

3585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CCGAAGGGAAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAATAT

U12 Branch Point Sequence:

AATATCCGAAGG

Flanking Amino Acid:

EMDVFNSQLKEEKKKRLEEE

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.6

90.6

20.3

Major BPS

50.9

0.02

1.1

47.4

35.7

Major PPT

38.4

-0.6

1.6

26.6

35.4

Minor 5ss

36.3

-1.6

3.3

47.2

Minor BPS

-0.8

45.35

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047373

109753143 - 109785437

32295